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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_4853Fumarylacetoacetate hydrolase family protein. (325 aa)    
Predicted Functional Partners:
CAP_4852
Maleylacetoacetate isomerase.
 
 
 0.988
fumC
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 0.928
CAP_4461
Succinate dehydrogenase flavoprotein subunit.
  
 
 0.926
CAP_4850
Homogentisate 1,2-dioxygenase.
 
  
 0.921
CAP_8802
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.914
CAP_4462
Succinate dehydrogenase iron-sulfur protein.
  
 
  0.910
CAP_4944
Succinate dehydrogenase cytochrome b558 subunit.
   
 
  0.909
CAP_4460
Succinate dehydrogenase cytochrome b subunit.
    
  0.906
CAP_4851
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.879
CAP_4409
Glutathione S-transferase.
 
 
 0.522
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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