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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_4908Hypothetical protein. (735 aa)    
Predicted Functional Partners:
CAP_4907
Hypothetical protein.
 
    
0.845
kynA
Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
       0.790
CAP_3861
Large extracellular alpha-helical protein.
  
     0.768
CAP_6969
RTX toxins and Ca2+-binding protein.
  
     0.766
CAP_4166
Hypothetical protein.
  
     0.764
CAP_4044
Hypothetical protein.
  
     0.758
CAP_4165
Hypothetical protein.
  
     0.758
CAP_8688
TPR domain protein, putative component of TonB system.
  
     0.757
CAP_7816
Cytochrome c family protein.
  
     0.750
CAP_8903
Hypothetical protein.
  
     0.748
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.