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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_4941Branched-chain amino acid ABC transporter, amino acid-binding protein. (393 aa)    
Predicted Functional Partners:
CAP_4942
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
CAP_7244
Branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.996
CAP_7245
Branched-chain amino acid transport ATP-binding protein LivG.
 
 
 0.995
CAP_7246
Branched-chain amino acid transport ATP-binding protein LivF.
 
 
 0.993
CAP_5446
Hypothetical protein.
  
  
 
0.872
CAP_5693
Two-component hybrid sensor and regulator.
   
 0.624
rpmE
Ribosomal protein L31; Binds the 23S rRNA.
  
    0.614
CAP_4943
Hypothetical protein.
       0.614
CAP_4939
Vitamin B12 ABC transporter, B12-binding component BtuF.
  
  
 0.527
CAP_3350
Hypothetical protein.
  
  
  0.514
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.