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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_5039ABC transporter related protein. (291 aa)    
Predicted Functional Partners:
CAP_5040
L-proline glycine betaine binding ABC transporter protein ProX.
 0.999
CAP_7216
Maltose/maltodextrin ABC transporter, permease protein MalF.
     
 0.928
CAP_5038
Lipoprotein releasing system transmembrane protein LolC.
       0.658
CAP_0898
Molybdenum transport system permease protein ModB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
    
 0.652
CAP_7217
Maltose/maltodextrin ABC transporter, permease protein MalG.
  
  
  0.548
cysS
Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.536
CAP_2380
Putrescine transport ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
  
  
 
0.520
CAP_7215
SN-glycerol-3-phosphate transport ATP-binding protein ugpC; Belongs to the ABC transporter superfamily.
  
  
 
0.512
CAP_8549
Nitrous oxide reductase maturation protein NosF (ATPase).
 
    
0.506
CAP_2445
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
  
  
 
0.502
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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