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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_5086Isochorismatase. (208 aa)    
Predicted Functional Partners:
CAP_8741
Allophanate hydrolase 2 subunit 1.
    
  0.731
CAP_8486
Hydrolase (isochorismatase family).
  
     0.694
CAP_5087
Oxidoreductase, aldo/keto reductase family.
  
    0.653
nnrD
NAD(P)HX epimerase / NAD(P)HX dehydratase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Belongs to the NnrE/AIBP family.
  
    0.615
CAP_5153
Long-chain-fatty-acid--CoA ligase.
  
 
 0.591
CAP_0900
Isochorismatase hydrolase.
  
     0.565
CAP_5125
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.486
CAP_1165
Alpha,alpha-trehalose-phosphate synthase/trehalose-phosphatase.
   
    0.470
CAP_1440
Hypothetical protein.
  
  
 0.469
CAP_6431
Phosphoglucomutase.
  
  
 0.439
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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