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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_5130Iron-chelator utilization protein. (267 aa)    
Predicted Functional Partners:
CAP_5153
Long-chain-fatty-acid--CoA ligase.
  
  
 0.746
CAP_4394
Hypothetical protein.
   
  0.718
CAP_4395
Hypothetical protein.
   
  0.718
CAP_6199
Putative lantibiotic ABC transporter, permease/ATP-binding protein.
   
  0.718
CAP_7689
Hypothetical protein.
   
  0.718
CAP_7880
Hemin transport protein HmuS.
  
  
 0.646
CAP_5339
Long-chain-fatty-acid--CoA ligase.
  
  
 0.580
CAP_5017
Para-aminobenzoate synthase, aminase component.
  
  
 0.543
CAP_7081
Anthranilate synthase, aminase component.
  
  
 0.543
CAP_7879
Hemin-binding periplasmic protein.
 
    0.528
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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