Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CAP_5215Phytoene synthase. (325 aa)    
Predicted Functional Partners:
CAP_5214
Phytoene dehydrogenase.
 
 0.997
CAP_5221
Geranylgeranyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 0.987
CAP_8701
Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.943
CAP_3080
Hypothetical protein.
 
 
 0.936
CAP_5220
Methoxyneurosporene dehydrogenase.
 
 0.936
CAP_5219
Hydroxyneurosporene synthase.
 
  
 0.927
CAP_6512
Octaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.919
CAP_2560
Isoprenyl diphosphate synthase/Farnesyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
  
 0.908
CAP_6776
Hypothetical protein.
 
 
 0.889
CAP_3043
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
   
 
 0.873
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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