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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_5219Hydroxyneurosporene synthase. (305 aa)    
Predicted Functional Partners:
CAP_5220
Methoxyneurosporene dehydrogenase.
 
 
 0.996
CAP_5214
Phytoene dehydrogenase.
 
 
 0.984
CAP_5221
Geranylgeranyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
  
 0.936
CAP_5215
Phytoene synthase.
 
  
 0.929
CAP_5216
Hypothetical protein.
   
 
 0.911
CAP_5218
Glycosyltransferase probably involved in cell wall biogenesis-like protein.
    
 0.850
CAP_3080
Hypothetical protein.
 
 
 0.783
CAP_6776
Hypothetical protein.
 
 
 0.676
CAP_1464
SAM-dependent methyltransferase.
 
  
 0.661
CAP_6924
Phytoene dehydrogenase.
 
 
 0.640
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.