Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CAP_0232 | CAP_5758 | CAP_0232 | CAP_5758 | Hypothetical protein. | Calerythrin (Calcium-binding protein). | 0.733 |
CAP_1251 | CAP_5758 | CAP_1251 | CAP_5758 | Peptidylprolyl isomerase. | Calerythrin (Calcium-binding protein). | 0.717 |
CAP_1251 | CAP_8704 | CAP_1251 | CAP_8704 | Peptidylprolyl isomerase. | Ser/Thr protein phosphatase family protein. | 0.950 |
CAP_4169 | CAP_5758 | CAP_4169 | CAP_5758 | Germacradienol/germacrene D synthase. | Calerythrin (Calcium-binding protein). | 0.676 |
CAP_4169 | guaB | CAP_4169 | CAP_7478 | Germacradienol/germacrene D synthase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.774 |
CAP_5758 | CAP_0232 | CAP_5758 | CAP_0232 | Calerythrin (Calcium-binding protein). | Hypothetical protein. | 0.733 |
CAP_5758 | CAP_1251 | CAP_5758 | CAP_1251 | Calerythrin (Calcium-binding protein). | Peptidylprolyl isomerase. | 0.717 |
CAP_5758 | CAP_4169 | CAP_5758 | CAP_4169 | Calerythrin (Calcium-binding protein). | Germacradienol/germacrene D synthase. | 0.676 |
CAP_5758 | CAP_6956 | CAP_5758 | CAP_6956 | Calerythrin (Calcium-binding protein). | FKBP-type peptidyl-prolyl cis-trans isomerase. | 0.717 |
CAP_5758 | CAP_8430 | CAP_5758 | CAP_8430 | Calerythrin (Calcium-binding protein). | Na+/H+ antiporter. | 0.649 |
CAP_5758 | CAP_8704 | CAP_5758 | CAP_8704 | Calerythrin (Calcium-binding protein). | Ser/Thr protein phosphatase family protein. | 0.964 |
CAP_5758 | argD | CAP_5758 | CAP_3127 | Calerythrin (Calcium-binding protein). | Succinylornithine transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.660 |
CAP_5758 | gmk | CAP_5758 | CAP_6917 | Calerythrin (Calcium-binding protein). | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.875 |
CAP_5758 | guaB | CAP_5758 | CAP_7478 | Calerythrin (Calcium-binding protein). | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.718 |
CAP_5758 | ndk | CAP_5758 | CAP_3334 | Calerythrin (Calcium-binding protein). | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.721 |
CAP_6956 | CAP_5758 | CAP_6956 | CAP_5758 | FKBP-type peptidyl-prolyl cis-trans isomerase. | Calerythrin (Calcium-binding protein). | 0.717 |
CAP_6956 | CAP_8704 | CAP_6956 | CAP_8704 | FKBP-type peptidyl-prolyl cis-trans isomerase. | Ser/Thr protein phosphatase family protein. | 0.950 |
CAP_8430 | CAP_5758 | CAP_8430 | CAP_5758 | Na+/H+ antiporter. | Calerythrin (Calcium-binding protein). | 0.649 |
CAP_8430 | CAP_8704 | CAP_8430 | CAP_8704 | Na+/H+ antiporter. | Ser/Thr protein phosphatase family protein. | 0.689 |
CAP_8704 | CAP_1251 | CAP_8704 | CAP_1251 | Ser/Thr protein phosphatase family protein. | Peptidylprolyl isomerase. | 0.950 |
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