STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_7885Vitamin K-dependent gamma-carboxylase. (494 aa)    
Predicted Functional Partners:
CAP_1019
Vitamin K-dependent gamma-carboxylase.
  
  
 
0.913
CAP_7884
Hypothetical protein.
 
     0.888
CAP_7883
Hypothetical protein.
 
     0.808
CAP_7886
Outer membrane receptor for ferrienterochelin and colicins.
       0.789
CAP_4262
Iron-regulated protein A.
 
     0.709
CAP_2410
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
   
    0.665
CAP_3203
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.596
CAP_5135
Sorbitol dehydrogenase.
    
 0.523
CAP_5465
Hypothetical protein.
  
  
  0.484
CAP_1339
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.476
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.