Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KIX16547.1 | KIX16548.1 | SY26_17570 | SY26_17580 | Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.578 |
| KIX16547.1 | KIX16549.1 | SY26_17570 | SY26_17585 | Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family. | 0.528 |
| KIX16547.1 | KIX16550.1 | SY26_17570 | SY26_17590 | Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.483 |
| KIX16547.1 | KIX16624.1 | SY26_17570 | SY26_17575 | Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | 0.578 |
| KIX16548.1 | KIX16547.1 | SY26_17580 | SY26_17570 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.578 |
| KIX16548.1 | KIX16549.1 | SY26_17580 | SY26_17585 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family. | 0.815 |
| KIX16548.1 | KIX16550.1 | SY26_17580 | SY26_17590 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.797 |
| KIX16548.1 | KIX16624.1 | SY26_17580 | SY26_17575 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | 0.894 |
| KIX16549.1 | KIX16547.1 | SY26_17585 | SY26_17570 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family. | Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.528 |
| KIX16549.1 | KIX16548.1 | SY26_17585 | SY26_17580 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.815 |
| KIX16549.1 | KIX16550.1 | SY26_17585 | SY26_17590 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.702 |
| KIX16549.1 | KIX16624.1 | SY26_17585 | SY26_17575 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family. | Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | 0.701 |
| KIX16549.1 | rpsF | SY26_17585 | SY26_07860 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.415 |
| KIX16550.1 | KIX16547.1 | SY26_17590 | SY26_17570 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.483 |
| KIX16550.1 | KIX16548.1 | SY26_17590 | SY26_17580 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.797 |
| KIX16550.1 | KIX16549.1 | SY26_17590 | SY26_17585 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family. | 0.702 |
| KIX16550.1 | KIX16624.1 | SY26_17590 | SY26_17575 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | 0.637 |
| KIX16624.1 | KIX16547.1 | SY26_17575 | SY26_17570 | Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.578 |
| KIX16624.1 | KIX16548.1 | SY26_17575 | SY26_17580 | Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.894 |
| KIX16624.1 | KIX16549.1 | SY26_17575 | SY26_17585 | Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family. | 0.701 |
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