STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMB93754.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (203 aa)    
Predicted Functional Partners:
ftcD
Glutamate formiminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.997
AMB94691.1
Methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase; Catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.929
AMB94848.1
Formate--tetrahydrofolate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.929
gcvT
Glycine cleavage system protein T; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.928
AMB94816.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.925
AMB93579.1
methionyl-tRNA formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.914
purN
Phosphoribosylglycinamide formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.907
purH
Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Involved in de novo purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.903
AMB94954.1
2-aminoethylphosphonate--pyruvate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.508
AMB94756.1
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.508
Your Current Organism:
Aerococcus sanguinicola
NCBI taxonomy Id: 119206
Other names: A. sanguinicola, Aerococcus sanguicola, Aerococcus sanguinicola corrig. Lawson et al. 2001 emend. Tohno et al. 2014, Aerococcus sp. CCUG 43001, CCUG 43001, CIP 106533, DSM 15633, JCM 11549
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