STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDB08987.1KEGG: transcriptional regulator; PFAM: Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein. (349 aa)    
Predicted Functional Partners:
KDB08410.1
KEGG: AraC family regulatory protein; PFAM: AraC protein arabinose-binding/dimerization, Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein.
  
   0.758
KDB08286.1
DJ-1 domain, InhA-type; KEGG: AraC family transcriptional regulator; PFAM: DJ-1 domain, InhA-type, Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein.
  
     0.750
KDB10132.1
KEGG: AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC domain-containing protein, AraC protein arabinose-binding/dimerization; SMART: Helix-turn-helix, AraC domain-containing protein.
  
   0.681
KDB09186.1
KEGG: AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC domain-containing protein, AraC protein arabinose-binding/dimerization; SMART: Helix-turn-helix, AraC domain-containing protein.
  
   0.667
KDB08525.1
KEGG: AraC family regulatory protein; PFAM: Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein.
  
     0.582
KDB09612.1
KEGG: AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein.
  
   0.544
KDB07088.1
KEGG: AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC domain-containing protein, AraC protein arabinose-binding/dimerization; SMART: Helix-turn-helix, AraC domain-containing protein.
  
   0.493
KDB08988.1
PFAM: glycosyl transferase family 9; KEGG: putative glycosyltransferase.
       0.473
KDB06097.1
KEGG: AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein.
  
   0.457
KDB07711.1
KEGG: AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC domain-containing protein, AraC protein arabinose-binding/dimerization; SMART: Helix-turn-helix, AraC domain-containing protein.
  
   0.442
Your Current Organism:
Burkholderia sp. lig30
NCBI taxonomy Id: 1192124
Other names: B. sp. lig30
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