STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JBW_03374KEGG: asparagine synthase; PFAM: asparagine synthase, glutamine amidotransferase class-II; TIGRFAM: asparagine synthase (glutamine-hydrolyzing). (614 aa)    
Predicted Functional Partners:
pyrB
TIGRFAM: aspartate carbamoyltransferase; KEGG: pyrB, putative aspartate carbamoyltransferase; HAMAP : Aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain-containing protein, aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 
 0.921
argG
HAMAP : Argininosuccinate synthase; PFAM: argininosuccinate synthase; KEGG: argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 0.921
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.918
JBW_01111
TIGRFAM: aspartate racemase; KEGG: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; Belongs to the aspartate/glutamate racemases family.
    
 0.913
JBW_03758
KEGG: aspartate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase.
    
 0.913
JBW_04045
TIGRFAM: aspartate racemase; KEGG: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; Belongs to the aspartate/glutamate racemases family.
    
 0.913
JBW_00909
L-asparaginase, type II; SMART: Asparaginase/glutaminase; PFAM: Asparaginase/glutaminase; KEGG: ansB, L-asparaginase; TIGRFAM: L-asparaginase, type II; Belongs to the asparaginase 1 family.
     
 0.909
JBW_01185
KEGG: type I L-asparaginase; PFAM: Asparaginase/glutaminase; SMART: Asparaginase/glutaminase; TIGRFAM: L-asparaginase, type I.
     
 0.909
JBW_01522
KEGG: ansB, putative aspartate ammonia-lyase; PFAM: Lyase 1, N-terminal, Fumarase C.
     
 0.903
JBW_02592
TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase, glutamine amidotransferase class-II; KEGG: asparagine synthase.
  
  
 
0.903
Your Current Organism:
Pelosinus fermentans
NCBI taxonomy Id: 1192197
Other names: P. fermentans JBW45, Pelosinus fermentans JBW45, Pelosinus fermentans str. JBW45, Pelosinus fermentans strain JBW45
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