STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPJ21887.1PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)    
Predicted Functional Partners:
KPJ21888.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.996
KPJ23166.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.959
KPJ21812.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.931
KPJ23214.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.918
KPJ21889.1
Metallohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.895
KPJ22570.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.640
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
   0.625
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
     
 0.599
KPJ21886.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.451
KPJ22442.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.449
Your Current Organism:
Streptococcus phocae
NCBI taxonomy Id: 119224
Other names: ATCC 51973, CCUG 35103, DSM 15635, LMG 16735, LMG:16735, NCTC 12719, S. phocae, SVL 8399 H1, strain 8399 H1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.