STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MBESOW_P2535Unannotated protein. (392 aa)    
Predicted Functional Partners:
MBESOW_P1709
Unannotated protein.
     0.773
glgB
Unannotated protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.773
MBESOW_P2536
Unannotated protein.
  
    0.691
MBESOW_P2537
Unannotated protein.
       0.680
MBESOW_P2939
Unannotated protein.
  
     0.614
MBESOW_P2534
Unannotated protein.
       0.610
MBESOW_P2760
Unannotated protein.
  
 
 0.587
MBESOW_P1543
Unannotated protein.
  
 
 0.587
GCA_000277525_02800
Unannotated protein.
  
 
 0.576
MBESOW_P0125
Unannotated protein.
 
 
  0.501
Your Current Organism:
Sphingobium xenophagum
NCBI taxonomy Id: 1192759
Other names: S. xenophagum QYY, Sphingobium xenophagum QYY, Sphingomonas xenophaga QYY
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.