STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000277525_02921Unannotated protein. (311 aa)    
Predicted Functional Partners:
GCA_000277525_02920
Unannotated protein.
 
     0.860
GCA_000277525_02919
Unannotated protein.
 
     0.850
GCA_000277525_02915
Unannotated protein.
 
     0.813
GCA_000277525_02561
Unannotated protein.
 
     0.775
GCA_000277525_02565
Unannotated protein.
 
     0.774
GCA_000277525_02562
Unannotated protein.
 
     0.765
GCA_000277525_03450
Unannotated protein.
  
     0.758
GCA_000277525_02564
Unannotated protein.
  
     0.755
GCA_000277525_03738
Unannotated protein.
  
     0.749
MBESOW_P4161
Unannotated protein.
  
     0.742
Your Current Organism:
Sphingobium xenophagum
NCBI taxonomy Id: 1192759
Other names: S. xenophagum QYY, Sphingobium xenophagum QYY, Sphingomonas xenophaga QYY
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.