STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7441_102171Unannotated protein. (229 aa)    
Predicted Functional Partners:
C7441_102172
Unannotated protein; Belongs to the ABC transporter superfamily.
       0.678
xylB
Unannotated protein.
 
  
  0.673
C7441_12345
Unannotated protein; Belongs to the mannitol dehydrogenase family.
    
  0.625
C7441_10146
Unannotated protein.
    
  0.590
C7441_1296
Unannotated protein.
    
  0.574
tdh
Unannotated protein; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.
    
  0.574
C7441_102192
Unannotated protein.
  
     0.467
GCA_000304395_02116
Unannotated protein.
  
     0.409
C7441_1231
Unannotated protein.
 
     0.404
Your Current Organism:
Pseudaminobacter salicylatoxidans
NCBI taxonomy Id: 1192868
Other names: P. salicylatoxidans KCT001, Pseudaminobacter salicylatoxidans KCT001, Pseudaminobacter salicylatoxidans str. KCT001, Pseudaminobacter salicylatoxidans strain KCT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.