Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EPG74810.1 | EPG75740.1 | LEP1GSC058_1881 | LEP1GSC058_0700 | Rod binding protein. | Flagellar biosynthesis protein FliO domain protein. | 0.854 |
EPG74810.1 | flgA | LEP1GSC058_1881 | LEP1GSC058_1878 | Rod binding protein. | Flagella basal body P-ring formation protein FlgA. | 0.978 |
EPG74810.1 | flgB | LEP1GSC058_1881 | LEP1GSC058_3641 | Rod binding protein. | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.953 |
EPG74810.1 | flgG | LEP1GSC058_1881 | LEP1GSC058_1877 | Rod binding protein. | Flagellar basal-body rod protein FlgG. | 0.978 |
EPG74810.1 | flgH | LEP1GSC058_1881 | LEP1GSC058_1879 | Rod binding protein. | Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.984 |
EPG74810.1 | flgI | LEP1GSC058_1881 | LEP1GSC058_1880 | Rod binding protein. | Flagellar P-ring protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.981 |
EPG74810.1 | flgL | LEP1GSC058_1881 | LEP1GSC058_3293 | Rod binding protein. | Flagellar hook-associated protein 3. | 0.770 |
EPG74810.1 | fliG_1 | LEP1GSC058_1881 | LEP1GSC058_2158 | Rod binding protein. | Flagellar motor switch protein FliG. | 0.720 |
EPG74810.1 | fliJ | LEP1GSC058_1881 | LEP1GSC058_0681 | Rod binding protein. | Flagellar export protein FliJ. | 0.740 |
EPG74810.1 | fliM | LEP1GSC058_1881 | LEP1GSC058_2199 | Rod binding protein. | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.930 |
EPG75740.1 | EPG74810.1 | LEP1GSC058_0700 | LEP1GSC058_1881 | Flagellar biosynthesis protein FliO domain protein. | Rod binding protein. | 0.854 |
EPG75740.1 | flgA | LEP1GSC058_0700 | LEP1GSC058_1878 | Flagellar biosynthesis protein FliO domain protein. | Flagella basal body P-ring formation protein FlgA. | 0.933 |
EPG75740.1 | flgB | LEP1GSC058_0700 | LEP1GSC058_3641 | Flagellar biosynthesis protein FliO domain protein. | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.906 |
EPG75740.1 | flgG | LEP1GSC058_0700 | LEP1GSC058_1877 | Flagellar biosynthesis protein FliO domain protein. | Flagellar basal-body rod protein FlgG. | 0.748 |
EPG75740.1 | flgH | LEP1GSC058_0700 | LEP1GSC058_1879 | Flagellar biosynthesis protein FliO domain protein. | Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.978 |
EPG75740.1 | flgI | LEP1GSC058_0700 | LEP1GSC058_1880 | Flagellar biosynthesis protein FliO domain protein. | Flagellar P-ring protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.849 |
EPG75740.1 | flgL | LEP1GSC058_0700 | LEP1GSC058_3293 | Flagellar biosynthesis protein FliO domain protein. | Flagellar hook-associated protein 3. | 0.918 |
EPG75740.1 | fliG_1 | LEP1GSC058_0700 | LEP1GSC058_2158 | Flagellar biosynthesis protein FliO domain protein. | Flagellar motor switch protein FliG. | 0.889 |
EPG75740.1 | fliJ | LEP1GSC058_0700 | LEP1GSC058_0681 | Flagellar biosynthesis protein FliO domain protein. | Flagellar export protein FliJ. | 0.946 |
EPG75740.1 | fliM | LEP1GSC058_0700 | LEP1GSC058_2199 | Flagellar biosynthesis protein FliO domain protein. | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.927 |
page 1 of 6