STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPG75236.1SPFH domain/Band 7 family protein. (308 aa)    
Predicted Functional Partners:
hflB
ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.918
EPG75232.1
Nodulation efficiency protein NfeD.
 
  
 0.907
EPG75524.1
SPFH domain/Band 7 family protein.
 
    
0.844
EPG75443.1
Heme-binding domain protein.
       0.633
EPG75221.1
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
   0.631
argH
Argininosuccinate lyase.
       0.607
EPG75281.1
ATPase, AAA family.
   
 
 0.576
EPG75560.1
Hypothetical protein.
       0.569
fliM
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
    0.548
EPG72961.1
Hypothetical protein; Belongs to the UPF0301 (AlgH) family.
   
    0.541
Your Current Organism:
Leptospira fainei
NCBI taxonomy Id: 1193011
Other names: L. fainei serovar Hurstbridge str. BUT 6, Leptospira fainei serovar Hurstbridge str. BUT 6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.