STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPG72877.1Hypothetical protein; Identified by glimmer; putative. (61 aa)    
Predicted Functional Partners:
sucB
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
       0.723
lpdA_2
Dihydrolipoyl dehydrogenase.
       0.703
sucA
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
       0.688
EPG73846.1
Transglycosylase.
       0.545
EPG73720.1
Beta-lactamase family protein.
       0.545
EPG74359.1
Hypothetical protein.
       0.447
Your Current Organism:
Leptospira fainei
NCBI taxonomy Id: 1193011
Other names: L. fainei serovar Hurstbridge str. BUT 6, Leptospira fainei serovar Hurstbridge str. BUT 6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.