STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPG68236.1PF09957 family protein. (63 aa)    
Predicted Functional Partners:
EPG68097.1
PIN domain protein.
 
   0.973
EPG64801.1
Membrane protein, PF10101 family.
  
     0.566
EPG64921.1
Hypothetical protein.
  
     0.562
EPG65779.1
PF14367 domain protein.
 
   0.551
EPG64523.1
Putative toxin-antitoxin system, toxin component, PIN family.
 
   0.551
vapC
PIN domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
   0.546
EPG67151.1
Outer membrane efflux protein.
  
     0.511
EPG64708.1
SpoIIE-like protein phosphatase domain protein.
  
     0.484
EPG66827.1
Hypothetical protein.
  
     0.464
EPG68033.1
Hypothetical protein; Identified by glimmer; putative.
       0.461
Your Current Organism:
Leptospira wolffii
NCBI taxonomy Id: 1193069
Other names: L. wolffii serovar Khorat str. Khorat-H2, Leptospira wolffii serovar Khorat str. Khorat-H2, Leptospira wolffii str. Khorat-H2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.