STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A200_01466COG0395 ABC-type sugar transport system, permease component. (310 aa)    
Predicted Functional Partners:
A200_01456
Sugar binding protein of ABC transporter system; COG1653 ABC-type sugar transport system, periplasmic component.
 
 0.999
A200_01461
COG1175 ABC-type sugar transport systems, permease components.
 
0.998
A200_06067
ABC transporter permease; COG1175 ABC-type sugar transport systems, permease components.
 
 0.996
A200_06057
ABC transporter substrate-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
  0.992
A200_02905
Sugars ABC transporter ATP-binding protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.991
A200_06062
ABC transporter permease; COG0395 ABC-type sugar transport system, permease component.
  
  
 
0.961
A200_05692
COG1175 ABC-type sugar transport systems, permease components.
  0.944
A200_01065
ABC transporter permease; COG1175 ABC-type sugar transport systems, permease components.
  0.940
A200_02564
COG1175 ABC-type sugar transport systems, permease components.
  0.929
A200_06187
Carbohydrate ABC transporter membrane protein 1, CUT1 family; COG1175 ABC-type sugar transport systems, permease components.
  0.926
Your Current Organism:
Parascardovia denticolens
NCBI taxonomy Id: 1193128
Other names: P. denticolens IPLA 20019, Parascardovia denticolens IPLA 20019, Parascardovia denticolens str. IPLA 20019, Parascardovia denticolens strain IPLA 20019
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.