STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A200_02479Hypothetical protein; COG1131 ABC-type multidrug transport system, ATPase component. (337 aa)    
Predicted Functional Partners:
A200_02474
Multidrug ABC transporter permease.
  
 
  0.929
A200_05202
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
  0.892
A200_02469
Hypothetical protein.
    
  0.848
A200_04104
Peptide ABC transporter substrate-binding protein; COG4172 ABC-type uncharacterized transport system, duplicated ATPase component.
  
 
0.773
A200_03574
ABC transporter permease; COG0842 ABC-type multidrug transport system, permease component.
  
 
  0.732
A200_07073
Cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydC; COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components.
 
 
0.724
A200_05912
Fused ATP-binding protein and permease of ABC transporter; COG1122 ABC-type cobalt transport system, ATPase component.
 
  
 
0.712
A200_05547
COG1122 ABC-type cobalt transport system, ATPase component.
 
  
 
0.674
A200_07078
ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
  
 
0.666
atpE
ATP synthase F0 subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
    
  0.629
Your Current Organism:
Parascardovia denticolens
NCBI taxonomy Id: 1193128
Other names: P. denticolens IPLA 20019, Parascardovia denticolens IPLA 20019, Parascardovia denticolens str. IPLA 20019, Parascardovia denticolens strain IPLA 20019
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