STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A200_03709COG1961 Site-specific recombinases, DNA invertase Pin homologs. (138 aa)    
Predicted Functional Partners:
A200_03704
COG1961 Site-specific recombinases, DNA invertase Pin homologs.
 
     0.947
A200_03684
Glycosyl hydrolase-like protein; COG3858 Predicted glycosyl hydrolase.
 
     0.813
A200_03659
Phage tail component; COG4722 Phage-related protein.
 
     0.748
A200_03699
Hypothetical protein.
  
    0.635
A200_03654
Phage tail tape measure protein, TP901 family; COG5412 Phage-related protein.
 
     0.460
A200_03689
Holin; COG4824 Phage-related holin (Lysis protein).
       0.437
A200_03694
Endolysin; COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
       0.409
Your Current Organism:
Parascardovia denticolens
NCBI taxonomy Id: 1193128
Other names: P. denticolens IPLA 20019, Parascardovia denticolens IPLA 20019, Parascardovia denticolens str. IPLA 20019, Parascardovia denticolens strain IPLA 20019
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.