STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A200_03744ABC transporter substrate-binding protein; COG4166 ABC-type oligopeptide transport system, periplasmic component. (596 aa)    
Predicted Functional Partners:
A200_03764
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.962
A200_03759
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.959
A200_03754
Dipeptide transport ATP-binding protein; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.944
A200_01090
ABC transporter substrate-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
 
 0.854
A200_04104
Peptide ABC transporter substrate-binding protein; COG4172 ABC-type uncharacterized transport system, duplicated ATPase component.
  
 
 0.838
A200_04114
Peptides ABC transporter substrate binding component; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.835
A200_04109
Peptide ABC transporter substrate-binding protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.827
A200_03769
COG4166 ABC-type oligopeptide transport system, periplasmic component.
 
  
 
0.807
A200_04119
Peptide ABC transporter substrate-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
 
 0.807
A200_03814
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.803
Your Current Organism:
Parascardovia denticolens
NCBI taxonomy Id: 1193128
Other names: P. denticolens IPLA 20019, Parascardovia denticolens IPLA 20019, Parascardovia denticolens str. IPLA 20019, Parascardovia denticolens strain IPLA 20019
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.