STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A200_05082Hypothetical protein. (439 aa)    
Predicted Functional Partners:
A200_06614
COG2011 ABC-type metal ion transport system, permease component.
  
 0.984
A200_06604
NLPA lipoprotein; COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen.
  
 0.975
A200_05087
Hypothetical protein.
 
     0.916
A200_01821
COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
    
  0.707
A200_04867
NAD-dependent oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
    
   0.538
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
  
 0.460
A200_05092
Carboxymuconolactone decarboxylase; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
       0.445
A200_01351
COG0031 Cysteine synthase.
    
 0.410
Your Current Organism:
Parascardovia denticolens
NCBI taxonomy Id: 1193128
Other names: P. denticolens IPLA 20019, Parascardovia denticolens IPLA 20019, Parascardovia denticolens str. IPLA 20019, Parascardovia denticolens strain IPLA 20019
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.