STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A200_05457Cell envelope-related transcriptional attenuator; COG1316 Transcriptional regulator. (469 aa)    
Predicted Functional Partners:
A200_05462
Hypothetical protein; COG1316 Transcriptional regulator.
 
   
0.868
A200_05452
Hypothetical protein; COG1216 Predicted glycosyltransferases.
 
     0.725
A200_07103
Hypothetical protein; COG0392 Predicted integral membrane protein.
  
     0.660
A200_05447
Hypothetical protein.
       0.641
A200_04654
COG1560 Lauroyl/myristoyl acyltransferase.
  
     0.559
A200_08443
Hypothetical protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
 
     0.543
A200_00470
COG3583 Uncharacterized protein conserved in bacteria.
  
     0.539
A200_05467
Hypothetical protein; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
 
     0.537
A200_03182
COG2064 Flp pilus assembly protein TadC.
  
     0.532
A200_06878
TraG-related protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
 
     0.508
Your Current Organism:
Parascardovia denticolens
NCBI taxonomy Id: 1193128
Other names: P. denticolens IPLA 20019, Parascardovia denticolens IPLA 20019, Parascardovia denticolens str. IPLA 20019, Parascardovia denticolens strain IPLA 20019
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.