STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A200_05592Sugar ABC transporter substrate-binding protein; COG1653 ABC-type sugar transport system, periplasmic component. (437 aa)    
Predicted Functional Partners:
A200_05582
Putative sugar transport integral membrane protein; COG0395 ABC-type sugar transport system, permease component.
 
  0.996
A200_05587
COG1175 ABC-type sugar transport systems, permease components.
 
  0.984
A200_02559
Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component.
  
 0.943
A200_02905
Sugars ABC transporter ATP-binding protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
 0.926
A200_00675
COG1175 ABC-type sugar transport systems, permease components.
 
  0.892
A200_00670
ABC transporter permease; COG0395 ABC-type sugar transport system, permease component.
 
  0.890
A200_00625
ABC transporter permease; COG1175 ABC-type sugar transport systems, permease components.
 
  0.887
A200_01461
COG1175 ABC-type sugar transport systems, permease components.
  
 0.882
A200_06067
ABC transporter permease; COG1175 ABC-type sugar transport systems, permease components.
  
 0.882
A200_00620
ABC transporter permease; COG0395 ABC-type sugar transport system, permease component.
 
  0.879
Your Current Organism:
Parascardovia denticolens
NCBI taxonomy Id: 1193128
Other names: P. denticolens IPLA 20019, Parascardovia denticolens IPLA 20019, Parascardovia denticolens str. IPLA 20019, Parascardovia denticolens strain IPLA 20019
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