STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A200_06217COG1609 Transcriptional regulators. (353 aa)    
Predicted Functional Partners:
A200_00195
Bacterial regulatory protein, LacI family; COG1609 Transcriptional regulators.
  
     0.775
A200_01075
COG1609 Transcriptional regulators.
  
     0.775
A200_01561
COG1609 Transcriptional regulators.
  
     0.775
A200_02980
COG1609 Transcriptional regulators.
  
     0.775
A200_00595
COG1609 Transcriptional regulators.
  
     0.774
A200_03919
PTS system glucose-specific transporter subunit IIABC PtsG; COG1264 Phosphotransferase system IIB components.
    
 0.753
A200_00555
COG1609 Transcriptional regulators.
  
     0.748
A200_06227
Binding-protein-dependent transporter inner membrane component; COG0395 ABC-type sugar transport system, permease component.
    
  0.736
A200_00190
COG1129 ABC-type sugar transport system, ATPase component.
  
 
  0.636
A200_00185
Branched-chain amino acid ABC transporter permease; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  
 
  0.634
Your Current Organism:
Parascardovia denticolens
NCBI taxonomy Id: 1193128
Other names: P. denticolens IPLA 20019, Parascardovia denticolens IPLA 20019, Parascardovia denticolens str. IPLA 20019, Parascardovia denticolens strain IPLA 20019
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.