STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A200_06432COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (444 aa)    
Predicted Functional Partners:
A200_06422
COG3425 3-hydroxy-3-methylglutaryl CoA synthase.
  
 0.999
A200_07458
COG1250 3-hydroxyacyl-CoA dehydrogenase.
 0.999
A200_01811
Fatty acid synthase; COG0331 (acyl-carrier-protein) S-malonyltransferase.
  
 0.996
A200_06427
COG1257 Hydroxymethylglutaryl-CoA reductase.
 
  
 0.985
A200_05297
Phosphate acetyltransferase; COG0280 Phosphotransacetylase.
    
 0.936
A200_01816
COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
  
 0.871
A200_05722
Gluconate 5-dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
 0.858
A200_02381
Bifunctional acetaldehyde-CoA/alcohol dehydrogenase; COG1012 NAD-dependent aldehyde dehydrogenases; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.847
A200_01821
COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 0.828
A200_08184
COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
   
 0.780
Your Current Organism:
Parascardovia denticolens
NCBI taxonomy Id: 1193128
Other names: P. denticolens IPLA 20019, Parascardovia denticolens IPLA 20019, Parascardovia denticolens str. IPLA 20019, Parascardovia denticolens strain IPLA 20019
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