STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A200_07113Hypothetical protein; COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis. (225 aa)    
Predicted Functional Partners:
A200_07118
Hypothetical protein.
      0.953
A200_07108
COG0015 Adenylosuccinate lyase.
 
     0.791
A200_00160
Hypothetical protein; COG3173 Predicted aminoglycoside phosphotransferase.
  
     0.762
A200_01916
COG1112 Superfamily I DNA and RNA helicases and helicase subunits.
  
     0.745
A200_05897
Hypothetical protein.
  
     0.739
A200_05452
Hypothetical protein; COG1216 Predicted glycosyltransferases.
  
     0.735
A200_05857
Hypothetical protein; COG0461 Orotate phosphoribosyltransferase.
  
     0.733
A200_06247
Hypothetical protein.
  
     0.731
A200_07163
Hypothetical protein.
 
     0.723
A200_03152
Hypothetical protein.
  
     0.708
Your Current Organism:
Parascardovia denticolens
NCBI taxonomy Id: 1193128
Other names: P. denticolens IPLA 20019, Parascardovia denticolens IPLA 20019, Parascardovia denticolens str. IPLA 20019, Parascardovia denticolens strain IPLA 20019
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.