STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A200_07548COG0582 Integrase; Belongs to the 'phage' integrase family. (345 aa)    
Predicted Functional Partners:
A200_00985
Integrase family protein; COG0582 Integrase; Belongs to the 'phage' integrase family.
  
     0.734
A200_05297
Phosphate acetyltransferase; COG0280 Phosphotransacetylase.
    
 0.610
A200_07553
Hypothetical protein; COG3311 Predicted transcriptional regulator.
       0.495
der
Bifunctional cytidylate kinase/GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the cytidylate kinase family. Type 1 subfamily.
    
 0.456
A200_05432
COG1040 Predicted amidophosphoribosyltransferases.
   
    0.436
A200_06893
Integrase/recombinse; COG0582 Integrase; Belongs to the 'phage' integrase family.
  
     0.420
Your Current Organism:
Parascardovia denticolens
NCBI taxonomy Id: 1193128
Other names: P. denticolens IPLA 20019, Parascardovia denticolens IPLA 20019, Parascardovia denticolens str. IPLA 20019, Parascardovia denticolens strain IPLA 20019
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.