STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH68472.1CobG. (365 aa)    
Predicted Functional Partners:
cobH
Precorrin-8X methylmutase.
 
 0.995
cobIJ
Cobalamin biosynthesis protein CobIJ (Includes: Precorrin-2 C(20)-methyltransferase; Precorrin-3B C17-methyltransferase).
 
 
 0.995
CCH71485.1
Uroporphyrin-III C-methyltransferase,C-terminal:Siroheme synthase,N-terminal.
  
  
 0.911
cobN
Aerobic cobaltochelatase subunit CobN.
 
   
 0.897
CCH70941.1
Ptp (modular protein); Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
 0.890
BN10_10022
Stearoyl-CoA 9-desaturase electron transfer partner.
   
 0.879
CCH70778.1
Putative phenylacetic acid degradation NADH oxidoreductase PaaE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
 0.879
cbs
Putative Cystathionine beta-synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.861
cobF
Precorrin-6A synthase (deacetylating).
 
 
 0.853
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
  
 
 0.850
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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