STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN10_10013Hypothetical protein; No homology to any previously reported sequences. (52 aa)    
Predicted Functional Partners:
CCH68514.1
Putative two component system (Putative response sensor kinase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
 0.949
CCH69271.1
ATP-binding region, ATPase domain protein domain protein.
    
 0.949
CCH69956.1
Putative two-component system sensor kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
 0.949
mtrB
Sensor histidine kinase mtrB.
    
 0.949
CCH70174.1
Putative two-component system sensor kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
 0.949
CCH70500.1
Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
 0.949
CCH70902.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
    
 0.949
CCH68475.1
Putative ABC transporter ATP-binding protein in cobA 5'region; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
  
 0.905
rbsA
Ribose ABC transporter (ATP-binding protein); Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 0.905
CCH70756.1
Isoleucyl-tRNA synthetase (fragment).
    
   0.526
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.