STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN10_10018Putative ABC sugar transporter permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (284 aa)    
Predicted Functional Partners:
BN10_10019
ABC-type transporter, permease components.
 0.999
BN10_10017
Extracellular solute-binding protein family 1.
 
 0.995
ugpC
Glycerol-3-phosphate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily.
 0.993
ugpC-2
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
 0.993
CCH71536.1
ABC-type glucosylglycerol transport system permease protein.
 0.991
CCH71537.1
ABC-type glucosylglycerol transport system substrate-binding protein.
  
 0.953
CCH69806.1
ErfK/YbiS/YcfS/YnhG.
 
      0.541
BN10_10020
Hypothetical protein; No homology to any previously reported sequences.
       0.512
desA
Stearoyl-CoA 9-desaturase.
       0.502
BN10_10015
Glycerophosphoryl diester phosphodiesterase (fragment).
 
  
 0.480
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.