Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCH68494.1 | CCH68495.1 | BN10_1010009 | BN10_1010010 | Putative LysR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the LysR transcriptional regulatory family. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.548 |
CCH68494.1 | CCH69593.1 | BN10_1010009 | BN10_230036 | Putative LysR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the LysR transcriptional regulatory family. | Putative Transcriptional regulator, TetR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.410 |
CCH68494.1 | fadH | BN10_1010009 | BN10_1180009 | Putative LysR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the LysR transcriptional regulatory family. | 2,4-dienoyl-CoA reductase, NADH and FMN-linked; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.460 |
CCH68494.1 | gltA-2 | BN10_1010009 | BN10_860017 | Putative LysR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the LysR transcriptional regulatory family. | Glutamate synthase (large subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.677 |
CCH68494.1 | lsfA | BN10_1010009 | BN10_130033 | Putative LysR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the LysR transcriptional regulatory family. | Peroxiredoxin. | 0.450 |
CCH68495.1 | CCH68494.1 | BN10_1010010 | BN10_1010009 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative LysR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the LysR transcriptional regulatory family. | 0.548 |
CCH69593.1 | CCH68494.1 | BN10_230036 | BN10_1010009 | Putative Transcriptional regulator, TetR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Putative LysR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the LysR transcriptional regulatory family. | 0.410 |
fadH | CCH68494.1 | BN10_1180009 | BN10_1010009 | 2,4-dienoyl-CoA reductase, NADH and FMN-linked; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Putative LysR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the LysR transcriptional regulatory family. | 0.460 |
fadH | gltA-2 | BN10_1180009 | BN10_860017 | 2,4-dienoyl-CoA reductase, NADH and FMN-linked; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Glutamate synthase (large subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.999 |
gltA-2 | CCH68494.1 | BN10_860017 | BN10_1010009 | Glutamate synthase (large subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Putative LysR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the LysR transcriptional regulatory family. | 0.677 |
gltA-2 | fadH | BN10_860017 | BN10_1180009 | Glutamate synthase (large subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 2,4-dienoyl-CoA reductase, NADH and FMN-linked; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.999 |
gltA-2 | lsfA | BN10_860017 | BN10_130033 | Glutamate synthase (large subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Peroxiredoxin. | 0.576 |
lsfA | CCH68494.1 | BN10_130033 | BN10_1010009 | Peroxiredoxin. | Putative LysR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the LysR transcriptional regulatory family. | 0.450 |
lsfA | gltA-2 | BN10_130033 | BN10_860017 | Peroxiredoxin. | Glutamate synthase (large subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.576 |