STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH68569.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (228 aa)    
Predicted Functional Partners:
BN10_10022
Stearoyl-CoA 9-desaturase electron transfer partner.
  
 0.909
CCH70778.1
Putative phenylacetic acid degradation NADH oxidoreductase PaaE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.909
mrp
Protein mrp homolog; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.624
CCH68625.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.624
CCH71131.1
Fused enoyl-CoA hydratase and epimerase and isomerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.605
CCH68570.1
Putative ATP-dependent RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the DEAD box helicase family.
       0.546
CCH69287.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 0.538
CCH70330.1
Putative Membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.524
CCH69638.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.486
CCH68963.1
Putative ion-transporting ATPase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.483
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.