STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH68646.1Putative integral membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (156 aa)    
Predicted Functional Partners:
CCH68647.1
Putative secreted protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.943
cobS
Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
   
    0.824
cobIJ
Cobalamin biosynthesis protein CobIJ (Includes: Precorrin-2 C(20)-methyltransferase; Precorrin-3B C17-methyltransferase).
  
    0.816
ylmA
Uncharacterized ABC transporter ATP-binding protein ylmA.
       0.628
CCH70805.1
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
    0.576
CCH68644.1
Putative Glycogen synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.489
CCH70842.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
   
  
 0.457
nadE
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
 
     0.430
BN10_20006
Putative integral membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.423
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
       0.422
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.