STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH68844.1Putative transport system secreted protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (543 aa)    
Predicted Functional Partners:
oppCD
ABC-type dipeptide/oligopeptide/nickel transport system, fused permease and ATPase component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.995
nikE
ABC superfamily ATP binding cassette transporter,ABC protein.
 
 
 0.981
CCH68845.1
Putative oligopeptide transport system integral membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.977
yliD
Putative peptide transporter permease subunit: membrane component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 0.874
CCH69500.1
Putative peptide ABC transporter, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.874
CCH68848.1
Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate. Belongs to the DapA family.
 
     0.866
CCH68843.1
Transcriptional regulator.
 
     0.860
CCH69499.1
Putative peptide ABC transporter, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.851
dppB
Dipeptide transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 0.849
CCH69010.1
Oligopeptide/dipeptide ABC transporter,peptide-binding protein.
  
  
 
0.819
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.