STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH69000.1Hypothetical protein; No homology to any previously reported sequences. (66 aa)    
Predicted Functional Partners:
ctaC
Putative cytochrome c oxidase subunit 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.999
CCH69805.1
Putative membrane protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
 
 0.999
qcrB
Ubiquinol-cytochrome c reductase cytochrome b subunit.
 
 0.999
qcrA
Ubiquinol-cytochrome c reductase iron-sulfur subunit.
 
 
 0.999
qcrC
Menaquinol-cytochrome c reductase cytochrome c subunit.
 
 0.999
ctaE
Putative cytochrome c oxidase subunit 3; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.999
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 0.990
nuoM
NADH-quinone oxidoreductase subunit M.
   
 
 0.954
CCH69927.1
Putative NADH dehydrogenase I chain M; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
 
 0.954
CCH70935.1
Formate dehydrogenase, gamma subunit.
   
 
 0.953
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.