STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glmMPhosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. (448 aa)    
Predicted Functional Partners:
CCH71089.1
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing) (fragment).
 
 0.975
BN10_50019
N-acetylglucosamine-6-phosphate deacetylase.
     
 0.932
CCH71384.1
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.895
CCH71383.1
Bifunctional protein glmU (Includes: UDP-N-acetylglucosamine pyrophosphorylase; Glucosamine-1-phosphate N-acetyltransferase) (fragment).
 
 
 0.880
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily.
 
 
 0.858
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
  
 
 
 0.780
yvcJ
ATPase/kinase; Displays ATPase and GTPase activities.
 
     0.730
pgi
Glucosephosphate isomerase (Glucose-6-phosphate isomerase); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the GPI family.
  
 
 0.724
CCH70007.1
Putative RNA nucleotidyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
      0.719
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
   
  
 0.708
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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