Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCH69082.1 | CCH69083.1 | BN10_130096 | BN10_130097 | D-amino-acid dehydrogenase. | Putative transcriptional regulator, PucR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.716 |
CCH69083.1 | CCH69082.1 | BN10_130097 | BN10_130096 | Putative transcriptional regulator, PucR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | D-amino-acid dehydrogenase. | 0.716 |
CCH69083.1 | CCH69680.1 | BN10_130097 | BN10_300021 | Putative transcriptional regulator, PucR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. | 0.453 |
CCH69083.1 | CCH69981.1 | BN10_130097 | BN10_470016 | Putative transcriptional regulator, PucR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Chorismate synthase. | 0.516 |
CCH69083.1 | CCH70603.1 | BN10_130097 | BN10_610014 | Putative transcriptional regulator, PucR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.468 |
CCH69083.1 | menC | BN10_130097 | BN10_470015 | Putative transcriptional regulator, PucR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | O-succinylbenzoate-CoA synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.479 |
CCH69680.1 | CCH69083.1 | BN10_300021 | BN10_130097 | Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. | Putative transcriptional regulator, PucR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.453 |
CCH69981.1 | CCH69083.1 | BN10_470016 | BN10_130097 | Chorismate synthase. | Putative transcriptional regulator, PucR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.516 |
CCH69981.1 | menC | BN10_470016 | BN10_470015 | Chorismate synthase. | O-succinylbenzoate-CoA synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.984 |
CCH70603.1 | CCH69083.1 | BN10_610014 | BN10_130097 | Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Putative transcriptional regulator, PucR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.468 |
menC | CCH69083.1 | BN10_470015 | BN10_130097 | O-succinylbenzoate-CoA synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | Putative transcriptional regulator, PucR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.479 |
menC | CCH69981.1 | BN10_470015 | BN10_470016 | O-succinylbenzoate-CoA synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | Chorismate synthase. | 0.984 |