STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH69166.1Glycosyl transferase, group 1. (384 aa)    
Predicted Functional Partners:
CCH69165.1
Uncharacterized methyltransferase Mkms_0228.
 
     0.891
CCH69164.1
Coagulation factor 5/8 type domain protein.
 
     0.890
CCH69427.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.778
CCH69161.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.759
CCH68834.1
Glycoside hydrolase, family 13-like.
   
 0.752
treZ
Malto-oligosyltrehalose trehalohydrolase.
   
 0.743
CCH69168.1
Membrane hypothetical protein; No homology to any previously reported sequences.
  
     0.723
CCH69163.1
Acyltransferase 3.
  
    0.683
CCH68678.1
Putative N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.598
glgP
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
   
 0.555
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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