STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpC-2Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. (369 aa)    
Predicted Functional Partners:
BN10_10019
ABC-type transporter, permease components.
 
 0.999
CCH71536.1
ABC-type glucosylglycerol transport system permease protein.
 
 0.999
BN10_10017
Extracellular solute-binding protein family 1.
 0.998
CCH71535.1
ABC-type glucosylglycerol transport system permease protein.
 0.995
BN10_10018
Putative ABC sugar transporter permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 0.993
CCH71537.1
ABC-type glucosylglycerol transport system substrate-binding protein.
  
 0.981
modB
Molybdenum transport system permease protein modB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
  0.942
CCH71204.1
Hypothetical protein; No homology to any previously reported sequences.
  
 0.914
CCH69443.1
ABC-type multidrug transport system, ATPase component.
 
   
 
0.909
appD
Oligopeptide ABC transporter (ATP-binding protein); Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily.
 
     
0.900
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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