STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH69418.1Hypothetical protein; No homology to any previously reported sequences. (66 aa)    
Predicted Functional Partners:
CCH69164.1
Coagulation factor 5/8 type domain protein.
  
     0.626
CCH68895.1
Hypothetical protein; No homology to any previously reported sequences.
   
 
 0.591
CCH68830.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
   0.564
CCH71506.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
   0.564
CCH69161.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.521
CCH70346.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.501
CCH69168.1
Membrane hypothetical protein; No homology to any previously reported sequences.
  
     0.442
CCH69165.1
Uncharacterized methyltransferase Mkms_0228.
  
 
   0.433
CCH69162.1
Membrane hypothetical protein; No homology to any previously reported sequences.
  
     0.411
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.