STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH69574.1Putative phosphoglycerate mutase related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (227 aa)    
Predicted Functional Partners:
CCH69573.1
Phosphotransferase enzyme family protein.
 
    0.957
CCH69571.1
Acyl-CoA dehydrogenase domain protein.
 
 
   0.936
CCH69572.1
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.921
CCH69569.1
Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.684
CCH69146.1
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (fragment).
  
 
 0.675
BN10_50003
Hypothetical protein; No homology to any previously reported sequences.
  
     0.672
cbs
Putative Cystathionine beta-synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
  0.668
serB
Phosphoserine phosphatase.
    
 0.636
CCH69570.1
Transcriptional regulator, TetR family.
 
     0.633
rnhA
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
  
 
  0.619
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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