STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN10_30017Carbohydrate kinase, PfkB family protein. (308 aa)    
Predicted Functional Partners:
rpe
Ribulose-5-phosphate 3-epimerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.765
tkt
Transketolase; Function of strongly homologous gene; enzyme; Belongs to the transketolase family.
   
 0.737
CCH70721.1
Putative Transport-protein, permease for cytosine/purines; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the purine-cytosine permease (2.A.39) family.
 
     0.730
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.717
pgm
Phosphoglucomutase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.715
pfp
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.
   
 
 0.703
CCH71075.1
Putative nucleoside hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.701
CCH70736.1
5'-nucleotidase/2',3'-cyclic phosphodiesterase or related esterase; Belongs to the 5'-nucleotidase family.
    
 0.693
rpiB
Ribose-5-phosphate isomerase B; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.689
pdxT
Glutamine amidotransferase subunit pdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.
     
 0.674
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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