STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aspAAspartate ammonia-lyase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (477 aa)    
Predicted Functional Partners:
dcuA
C4-dicarboxylate antiporter; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
  
 0.929
fumA
Fumarate hydratase (fumarase A), aerobic Class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.877
yfbQ
Putative aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.851
CCH69915.1
Putative ferredoxin oxidoreductase (Putative pyruvate synthase (porA)) and gamma subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.828
CCH68879.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
   
 0.826
CCH69123.1
Putative Asparagine synthetase (glutamine-hydrolyzing) 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
     
  0.806
CCH70950.1
Asparagine synthase, glutamine-hydrolyzing.
     
  0.806
sdhA
Succinate dehydrogenase flavoprotein subunit SdhA; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.793
CCH69310.1
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.761
CCH70590.1
Hypothetical protein; No homology to any previously reported sequences.
  
  0.759
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.