STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH69966.1Putative phosphoglycerate mutase (gpmB); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (222 aa)    
Predicted Functional Partners:
CCH69967.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
   0.965
CCH69969.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.876
CCH69970.1
Putative cytochrome C assembly protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.874
CCH69968.1
Putative cytochrome biogenesis related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.860
CCH70254.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
   0.854
CCH69971.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
       0.821
CCH69029.1
Hypothetical protein; No homology to any previously reported sequences.
  
    0.790
hemL
Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (Glutamate-1-semialdehyde aminotransferase)(GSA-AT); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.790
CCH71224.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.790
CCH69146.1
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (fragment).
  
 
 0.675
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.